dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02211
Location and strand information: 1681143 - 1682447 (+)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 5.6094
Protein molecular weight: 48248.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02212
Location and strand information: 1682535 - 1683827 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02213
Location and strand information: 1684031 - 1684915 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02214
Location and strand information: 1684927 - 1685754 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02215
Location and strand information: 1685794 - 1687023 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02216
Location and strand information: 1687016 - 1687963 (+)
Family: PfkB
Protein type: STP
Protein description: Sulfofructose kinase

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02217
Location and strand information: 1688028 - 1690481 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2766
Protein molecular weight: 92797.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02218
Location and strand information: 1690582 - 1691718 (-)
Family: PL22_2|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 5.9012
Protein molecular weight: 42889
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02219
Location and strand information: 1691832 - 1693889 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02220
Location and strand information: 1694009 - 1696306 (-)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02221
Location and strand information: 1696503 - 1698044 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: Lipoprotein LipO

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02222
Location and strand information: 1698144 - 1699013 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02223
Location and strand information: 1699014 - 1699976 (-)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02224
Location and strand information: 1700571 - 1701347 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02225
Location and strand information: 1701171 - 1701599 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001404_2|CGC17
Gene ID: MGYG000001404_02226
Location and strand information: 1701632 - 1703113 (-)
Family: 2.A.1.3.30
Protein type: TC
Protein description: Multidrug export protein EmrB

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001404_02211	Alpha-galactosidase	CAZyme	1681143	1682447	+	GH4
MGYG000001404_02212	hypothetical protein	STP	1682535	1683827	+	SBP_bac_1
MGYG000001404_02213	Lactose transport system permease protein LacF	TC	1684031	1684915	+	3.A.1.1.11
MGYG000001404_02214	L-arabinose transport system permease protein AraQ	TC	1684927	1685754	+	3.A.1.1.36
MGYG000001404_02215	hypothetical protein	null	1685794	1687023	+	MFS_1
MGYG000001404_02216	Sulfofructose kinase	STP	1687016	1687963	+	PfkB
MGYG000001404_02217	hypothetical protein	CAZyme	1688028	1690481	-	GH95
MGYG000001404_02218	Oligogalacturonate lyase	CAZyme	1690582	1691718	-	PL22_2\| PL22
MGYG000001404_02219	hypothetical protein	null	1691832	1693889	-	No domain
MGYG000001404_02220	HTH-type transcriptional activator RhaR	TF	1694009	1696306	-	HTH_AraC
MGYG000001404_02221	Lipoprotein LipO	TC	1696503	1698044	-	3.A.1.1.10
MGYG000001404_02222	hypothetical protein	TC	1698144	1699013	-	3.A.1.1.10
MGYG000001404_02223	putative multiple-sugar transport system permease YteP	TC	1699014	1699976	-	3.A.1.1.10
MGYG000001404_02224	hypothetical protein	null	1700571	1701347	+	MFS_1
MGYG000001404_02225	hypothetical protein	null	1701171	1701599	-	No domain
MGYG000001404_02226	Multidrug export protein EmrB	TC	1701632	1703113	-	2.A.1.3.30
Protein ID	Protein Name	Type	Start	End	Strand	Signature